xlmhg 2.4.9

安装

$ pip install xlmhg

开始

xlmhg包提供两个功能（一个简单，一个更高级） 用于执行XL MHG测试。这些功能记录在 User Manual。下面是一个使用“simple”测试函数的快速示例：

importxlmhgstat,cutoff,pval=xlmhg.xlmhg_test(v,X,L)

其中：v是0和1的排名列表，由 整数、X和L是xl mhg参数，返回值有 以下含义：

• stat：xl mhg测试统计信息
• cutoff：获得xl mhg测试统计的截止值
• pval：xl mhg p值

文档

请参阅XL-mHG User Manual（托管在readthedocs上）。

引用xl mhg

如果你在研究中使用xl-mhg测试，请引用Eden et al. (PLoS Comput Biol, 2007)和Wagner (PLoS One, 2015)。

版权和许可

版权所有（c）2015-2017 Florian Wagner

XL-mHG is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License, Version 3,
as published by the Free Software Foundation.

This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
GNU General Public License for more details.

You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.