Giambartolomei等人的结肠方法。
coloc的Python项目详细描述
coloc
用于gwas和/或eqtl共域化的coloc方法的实现 由Giambartolomei et al发出信号。
安装
pip3 install coloc
或
pip3 install --user coloc
示例用法
fromcolocimportcoloc,print_coloc_resulthelp(coloc)print_coloc_result('not colocalized',*coloc([1,4,9],[9,4,1]))
not colocalized
PP0: [||||| ] [ 0.26540194014704316 ]
PP1: [|||| ] [ 0.21657860877712054 ]
PP2: [|||| ] [ 0.21657860877712054 ]
PP3: [||| ] [ 0.17661198683565493 ]
PP4: [|| ] [ 0.12482885546306076 ]
print_coloc_result('colocalized',*coloc([1,4,9],[1,4,9]))
colocalized
PP0: [ ] [ 0.0015168270421050444 ]
PP1: [ ] [ 0.001237791593959775 ]
PP2: [ ] [ 0.001237791593959775 ]
PP3: [ ] [ 1.4094001056824932e-05 ]
PP4: [||||||||||||||||||| ] [ 0.9959934957689188 ]
欢迎加入QQ群-->： 979659372
