下面的脚本在使用(F9)运行时可以正常工作。当使用(F5)运行它时,它仍然可以工作(所有操作都可以很好地完成),但会产生以下错误:
File "", line 1, in runfile('S:/Fakultaet/MFZ/NWFZ/AGdeHoz/Philipp/Python/Analysis_script.py',wdir='S:/Fakultaet/MFZ/NWFZ/AGdeHoz/Philipp/Python')
File "c:\anaconda3\lib\site-packages\spyder\utils\site\sitecustomize.py", line 709, in runfile namespace.pop('file')
KeyError: 'file'
我想知道发生了什么事,怎么解决它。在
我读到了一些关于嵌套问题的文章,所以我取出了导入我自己函数的部分和我使用它的部分。错误仍然存在。所以这至少和我自己的功能无关。在
from IPython import get_ipython
get_ipython().magic('%reset -f')
import time
tic = time.time()
import sys
import os
import pickle
import CSC_getdata_timestamps
General_folder = 'Data' #where processed data will be saved
filename_extension = '_Sleep_auditory'; #file extension name
Database_name = 'mydata.obj' #name of database
ExpDates = 'ExpDates.obj' #name of object containing all experimental
dates
root = r"S:\Fakultaet\MFZ\NWFZ\AGdeHoz\Philipp" #root directory (data
location)
AnalyType = "LFP" #"SP" Local field potential or Spike analysis
spr = 30000 #sample rate
Cname = "CH"
file_md = open(r"S:\Fakultaet\MFZ\NWFZ\AGdeHoz\Philipp\Data\Database\\" +
Database_name, "rb")
md = pickle.load(file_md)
file_ExpDates =
open(r"S:\Fakultaet\MFZ\NWFZ\AGdeHoz\Philipp\Data\Database\\" +
ExpDates, "rb")
ExpDates = pickle.load(file_ExpDates)
for mi, expdates in enumerate(ExpDates):
day = expdates
mouse = md[expdates]['mouse']
files = md[expdates]['rectime']
filesm = md[expdates]['FRAm'] + md[expdates]['REMm'] + md[expdates]
['SWSm'] + md[expdates]['awakem']
rect = md[expdates]['rect']
filest = [md[expdates]['FRAt'], md[expdates]['REMt'], md[expdates]
['SWSt'], md[expdates]['awaket']]
channels = md[expdates]['channels']
for f, files_m in enumerate(filesm):
try:
if len(files) == 1:
recname = files
else:
tfiles = []
tfilesm = []
for i, file in enumerate(files):
tfiles.append(int(files[i][0:2]) * 60 + int(files[i]
[3:5]))
tfilesm = int(files_m[f][0:2]) * 60 + int(files_m[f]
[3:5])
recidx = [i for i in range(len(tfiles)) if tfiles[i] <
tfilesm]
recname = files[recidx[-1]]
TS0 = (int(rect[0:2]) * 3600 + int(rect[3:5]) * 60 +
int(rect[6:8])) * spr
TS1 = TS0 + (int(filest[f][0][0:2]) * 3600 + int(filest[f][0]
[3:5]) * 60 + int(filest[f][0][6:8])) * spr
TS2 = TS0 + TS1 + (int(filest[f][1][0:2]) * 3600 +
int(filest[f][1][3:5]) * 60 + int(filest[f][1][6:8])) * spr
TS = [TS1, TS2]
savename = files_m[0:2] + "-" + files_m[3:5]
if AnalyType == "LFP":
if not os.path.exists(root + "\Data\Raw" +
filename_extension + "\LFP\\" + day):
os.makedirs(root + "\Data\Raw" + filename_extension +
"\LFP\\" + day)
else:
print("Directory already exists.")
elif AnalyType == "SP":
if not os.path.exists(root + "\Data\Raw" +
filename_extension + "\SP\\" + day):
os.makedirs(root + "\Data\Raw" + filename_extension +
"\SP\\" + day)
else:
print("Directory already exists.")
else:
sys.exit("Invalid type of analysis. Check variable
AnalyType.")
varlist, trseq, trlength, stlength, ntrials, datacscini,
samplefreq, tscsc, tstrig =
CSC_getdata_timestamps.CSC_getdata_timestamps(root, day,
savename, recname, channels, AnalyType, TS)
print(trseq)
except Exception as e:
print('Error: ' + str(e))
print('mi = {}, f = {}'.format(mi, f))
toc = round(time.time() - tic, 2)
print("elapsed time:", toc, "seconds")
整个脚本是将(1)个写入的数据库中的数据与(2)个数据帧相结合,其中包括(3)个录制过程中播放的声音的规范。 请原谅我,如果它写得很不和谐,我最近刚从Matlab切换过来。 这个脚本是为了在神经科学中应用。在
(Spyder maintainer here)此错误已在我们的最新版本中修复(3.3.4)。请打开Python提示并在那里运行来更新
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