AME包在CONDA环境下找不到模板

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dependencies: - bioconductor-seqlogo=1.56.0=r40_0 - blast=2.10.1=pl526he19e7b1_3 - clustalo=1.2.4=he1b5a44_3 - entrez-direct=13.9=pl526h375a9b1_1 - logomaker=0.8=pyh864c0ab_1 - meme=5.3.0=py37pl526h072abfd_0 - perl-app-cpanminus=1.7044=pl526_1 - perl-archive-tar=2.32=pl526_0 - perl-base=2.23=pl526_1 - perl-business-isbn=3.004=pl526_0 - perl-business-isbn-data=20140910.003=pl526_0 - perl-carp=1.38=pl526_3 - perl-cgi=4.44=pl526h14c3975_1 - perl-common-sense=3.74=pl526_2 - perl-compress-raw-bzip2=2.087=pl526he1b5a44_0 - perl-compress-raw-zlib=2.087=pl526hc9558a2_0 - perl-constant=1.33=pl526_1 - perl-data-dumper=2.173=pl526_0 - perl-dbi=1.642=pl526_0 - perl-digest-hmac=1.03=pl526_3 - perl-digest-md5=2.55=pl526_0 - perl-encode=2.88=pl526_1 - perl-encode-locale=1.05=pl526_6 - perl-exporter=5.72=pl526_1 - perl-exporter-tiny=1.002001=pl526_0 - perl-extutils-makemaker=7.36=pl526_1 - perl-file-listing=6.04=pl526_1 - perl-file-path=2.16=pl526_0 - perl-file-temp=0.2304=pl526_2 - perl-file-which=1.23=pl526_0 - perl-html-parser=3.72=pl526h6bb024c_5 - perl-html-tagset=3.20=pl526_3 - perl-html-template=2.97=pl526_1 - perl-html-tree=5.07=pl526_1 - perl-http-cookies=6.04=pl526_0 - perl-http-daemon=6.01=pl526_1 - perl-http-date=6.02=pl526_3 - perl-http-message=6.18=pl526_0 - perl-http-negotiate=6.01=pl526_3 - perl-io-compress=2.087=pl526he1b5a44_0 - perl-io-html=1.001=pl526_2 - perl-io-socket-ssl=2.066=pl526_0 - perl-io-zlib=1.10=pl526_2 - perl-json=4.02=pl526_0 - perl-json-xs=2.34=pl526h6bb024c_3 - perl-libwww-perl=6.39=pl526_0 - perl-list-moreutils=0.428=pl526_1 - perl-list-moreutils-xs=0.428=pl526_0 - perl-log-log4perl=1.49=pl526_0 - perl-lwp-mediatypes=6.04=pl526_0 - perl-lwp-protocol-https=6.07=pl526_4 - perl-math-cdf=0.1=pl526h14c3975_5 - perl-mime-base64=3.15=pl526_1 - perl-mozilla-ca=20180117=pl526_1 - perl-net-http=6.19=pl526_0 - perl-net-ssleay=1.88=pl526h90d6eec_0 - perl-ntlm=1.09=pl526_4 - perl-parent=0.236=pl526_1 - perl-pathtools=3.75=pl526h14c3975_1 - perl-scalar-list-utils=1.52=pl526h516909a_0 - perl-socket=2.027=pl526_1 - perl-storable=3.15=pl526h14c3975_0 - perl-test-requiresinternet=0.05=pl526_0 - perl-time-local=1.28=pl526_1 - perl-try-tiny=0.30=pl526_1 - perl-types-serialiser=1.0=pl526_2 - perl-uri=1.76=pl526_0 - perl-www-robotrules=6.02=pl526_3 - perl-xml-namespacesupport=1.12=pl526_0 - perl-xml-sax=1.02=pl526_0 - perl-xml-sax-base=1.09=pl526_0 - perl-xml-sax-expat=0.51=pl526_3 - perl-xml-simple=2.25=pl526_1 - perl-xsloader=0.24=pl526_0 - perl-yaml=1.29=pl526_0 - _libgcc_mutex=0.1=conda_forge - _openmp_mutex=4.5=1_gnu - _r-mutex=1.0.1=anacondar_1 - argtable2=2.13=h14c3975_1001 - binutils_impl_linux-64=2.35.1=h193b22a_2 - binutils_linux-64=2.35=h67ddf6f_30 - biopython=1.78=py37h5e8e339_1 - bwidget=1.9.14=ha770c72_0 - bzip2=1.0.8=h7f98852_4 - c-ares=1.17.1=h36c2ea0_0 - ca-certificates=2020.12.5=ha878542_0 - cairo=1.16.0=hcf35c78_1003 - certifi=2020.12.5=py37h89c1867_1 - curl=7.71.1=he644dc0_8 - cycler=0.10.0=py_2 - dbus=1.13.6=he372182_0 - expat=2.2.10=h9c3ff4c_0 - fontconfig=2.13.1=hba837de_1004 - freetype=2.10.4=h0708190_1 - fribidi=1.0.10=h36c2ea0_0 - gcc_impl_linux-64=7.5.0=hda68d29_13 - gcc_linux-64=7.5.0=h47867f9_30 - gettext=0.19.8.1=hf34092f_1004 - gfortran_impl_linux-64=7.5.0=h56cb351_18 - gfortran_linux-64=7.5.0=h78c8a43_30 - ghostscript=9.53.3=h58526e2_2 - glib=2.66.1=h680cd38_0 - graphite2=1.3.13=h58526e2_1001 - gsl=2.6=he838d99_2 - gst-plugins-base=1.14.5=h0935bb2_2 - gstreamer=1.14.5=h36ae1b5_2 - gxx_impl_linux-64=7.5.0=h64c220c_13 - gxx_linux-64=7.5.0=h555fc39_30 - harfbuzz=2.4.0=h9f30f68_3 - icu=64.2=he1b5a44_1 - jpeg=9d=h36c2ea0_0 - kernel-headers_linux-64=2.6.32=h77966d4_13 - kiwisolver=1.3.1=py37h2527ec5_1 - krb5=1.17.2=h926e7f8_0 - lcms2=2.12=hddcbb42_0 - ld_impl_linux-64=2.35.1=hea4e1c9_2 - libblas=3.9.0=8_openblas - libcblas=3.9.0=8_openblas - libclang=9.0.1=default_hde54327_0 - libcurl=7.71.1=hcdd3856_8 - libedit=3.1.20191231=he28a2e2_2 - libev=4.33=h516909a_1 - libffi=3.2.1=he1b5a44_1007 - libgcc-ng=9.3.0=h2828fa1_18 - libgfortran-ng=7.5.0=h14aa051_18 - libgfortran4=7.5.0=h14aa051_18 - libgomp=9.3.0=h2828fa1_18 - libiconv=1.16=h516909a_0 - liblapack=3.9.0=8_openblas - libllvm9=9.0.1=hf817b99_2 - libnghttp2=1.43.0=h812cca2_0 - libopenblas=0.3.12=pthreads_hb3c22a3_1 - libpng=1.6.37=h21135ba_2 - libssh2=1.9.0=hab1572f_5 - libstdcxx-ng=9.3.0=h6de172a_18 - libtiff=4.2.0=hdc55705_0 - libuuid=2.32.1=h7f98852_1000 - libwebp-base=1.2.0=h7f98852_0 - libxcb=1.13=h7f98852_1003 - libxkbcommon=0.10.0=he1b5a44_0 - libxml2=2.9.10=hee79883_0 - libxslt=1.1.33=h31b3aaa_0 - lz4-c=1.9.3=h9c3ff4c_0 - make=4.3=hd18ef5c_1 - matplotlib=3.3.4=py37h89c1867_0 - matplotlib-base=3.3.4=py37h0c9df89_0 - mpi=1.0=openmpi - ncurses=6.2=h58526e2_4 - nspr=4.29=h9c3ff4c_1 - nss=3.61=hb5efdd6_0 - numpy=1.20.1=py37haa41c4c_0 - olefile=0.46=pyh9f0ad1d_1 - openmpi=4.0.5=ha4a8674_4 - openssl=1.1.1j=h7f98852_0 - pandas=1.1.2=py37h3340039_0 - pango=1.42.4=h7062337_4 - pcre=8.44=he1b5a44_0 - pcre2=10.35=h032f7d1_2 - perl=5.26.2=h36c2ea0_1008 - perl-xml-parser=2.44_01=pl526ha1d75be_1002 - pillow=8.1.0=py37h4600e1f_2 - pip=21.0.1=pyhd8ed1ab_0 - pixman=0.38.0=h516909a_1003 - pthread-stubs=0.4=h36c2ea0_1001 - pyparsing=2.4.7=pyh9f0ad1d_0 - pypdf2=1.26.0=py_2 - pyqt=5.12.3=py37h8685d9f_3 - python=3.7.8=h8bdb77d_2_cpython - python-dateutil=2.8.1=py_0 - python_abi=3.7=1_cp37m - pytz=2021.1=pyhd8ed1ab_0 - qt=5.12.5=hd8c4c69_1 - r-base=4.0.2=h95c6c4b_0 - readline=8.0=he28a2e2_2 - reportlab=3.5.60=py37h69800bb_0 - scipy=1.5.3=py37h8911b10_0 - sed=4.8=he412f7d_0 - setuptools=49.6.0=py37h89c1867_3 - six=1.15.0=pyh9f0ad1d_0 - sqlite=3.34.0=h74cdb3f_0 - sysroot_linux-64=2.12=h77966d4_13 - tk=8.6.10=h21135ba_1 - tktable=2.10=hb7b940f_3 - tornado=6.1=py37h5e8e339_1 - wheel=0.36.2=pyhd3deb0d_0 - xorg-kbproto=1.0.7=h7f98852_1002 - xorg-libice=1.0.10=h516909a_0 - xorg-libsm=1.2.3=h84519dc_1000 - xorg-libx11=1.6.12=h516909a_0 - xorg-libxau=1.0.9=h7f98852_0 - xorg-libxdmcp=1.1.3=h7f98852_0 - xorg-libxext=1.3.4=h516909a_0 - xorg-libxrender=0.9.10=h516909a_1002 - xorg-renderproto=0.11.1=h14c3975_1002 - xorg-xextproto=7.3.0=h7f98852_1002 - xorg-xproto=7.0.31=h7f98852_1007 - xz=5.2.5=h516909a_1 - yaml=0.2.5=h516909a_0 - zlib=1.2.11=h516909a_1010 - zstd=1.4.8=ha95c52a_1

1条回答

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1楼 · 发布于 2024-10-08 18:31:16

我不太确定用户在这里能得到什么帮助The linked repo Issue清楚地描述了这个问题，唯一的解决方法是使用较旧的版本，但该解决方法需要Python<=3.6，在当前环境中与OP的Python 3.7冲突

如果真的只需要Python 3，而不需要特别的3.7，那么使用Python 3.6和MEME的变通版本创建一个新环境：

conda create -n meme -c conda-forge -c bioconda python=3 bioconda/label/cf201901::meme

否则，您需要征求原料维护人员来解决这个问题，即add your voice to the issue

_{[1]：在当前环境中也可能尝试降级到Python 3.6，但在现有环境中更改Python版本总是需要更改过多的包，因此不会节省任何空间。此外，康达解决新环境创建问题的速度要比改变现有环境快得多。}

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